Figure 1. Representation of different approaches for genetic evaluations. (IMAGE)
Caption
Blue boxes represent the final genome-wide association study and are identical between the four approaches. The differences lie in the input of the response variable: A) the input is the visual score (VS) assigned by trained staff and adjusted for experimental design; B) replaces the VS by an individual specific vegetation index (VI) adjusted for experimental design; C) uses a phenomic prediction approach to predict the VS from phenomic data with a trained prediction model; D) instead of phenotypes adjusted to the experimental design only, genomic estimated breeding values (GEBVs) are used in the phenomic prediction of VS.
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