The "Pac-Man enzyme" (IMAGE)
Caption
The image shows a structural model of the recently discovered plastic depolymerase, modelled using AlphaFold3. It has a particularly wide-open active centre to which large substrates, such as polymer chains, can bind. Models of the substrates bound to the active centre (modelled using AutoDock 4) are shown on the right for the bioplastics PCL and LCAP (PE-12,12), and for the beta-lactam antibiotic ampicillin. To the far left of the structural model is a flexible tail to which the membrane anchor (lipid anchor) can be attached.
Credit
The ISME Journal, DOI 10.1093/ismejo/wrag203, Figure 7 cropped
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