To the amazement of researchers in immunology and genetics, a previously unsuspected mechanism is activated in the presence of pathogens after only a few hours. "In the hours following an attack by bacteria, we observed the activation of thousand of genes in the cells of the innate immune system (the one we are born with) and the triggering of its immune defences," said Luis Barreiro, a researcher at the Sainte-Justine University Hospital Center (CHU Saint-Justine) and professor at the University of Montreal. "We were surprised that the bacterial infection caused thousands of changes in DNA methylation, while this epigenetic imprint was thought to be stable and non-reactive to environmental perturbations," he added.
To reach this conclusion, the researcher and his team inoculated a live strain of Mycobacterium tuberculosis (the pathogen that causes tuberculosis in humans) to dendritic cells, which make up the innate immune system "In addition to observing thousands of DNA methylation changes very quickly after infection, there was a significant loss of methylation, which was strongly linked to the activation of neighbouring genes," said the principal investigator of the study.
Another surprising fact was that the reaction took place in the dendritic cells, whereas the latter did not multiply. "Normally demethylation occurs during cell division. The rapid triggering of this epigenetic change in cells that did not divide surprised us," said Alain Pacis, a doctoral student and first author of the study. "We must further explore the mechanism that makes this process possible."
Recent studies suggest that after first encountering a pathogen or other immune stimuli, innate immune cells keep the attack in memory to respond more effectively and more rapidly to future attacks, much like the adaptive immune system. According to Barreiro, the ability of these cells to remember past attacks can be explained by the lasting epigenetic changes that occur during the first infection. "Several clues lead us to believe that the innate immune system also has immunological memory, and the demethylation of DNA may play an important role in the acquisition of this memory. This is another avenue to verify."
Much remains to be done to explain the mysteries surrounding DNA methylation and the mechanisms by which it regulates the innate immune system and gives it a certain memory. Nevertheless, the discovery of the researchers sheds new light on how to approach the development of vaccines, in particular, by further considering the role of various epigenetic perturbations in triggering the immune response.
About the study
The article "Bacterial infection remodels the DNA methylation landscape of human dendritic cells" was published in the journal Genome Research. Luis Barreiro, PhD, is a researcher at Sainte-Justine University Hospital Research Center (CHU Saint-Justine) and an assistant professor in the Department of Pediatrics, University of Montreal. He has received financial support from the Canadian Institutes of Health Research (CIHR), the Human Frontiers Science Program, and the Canadian Research Chairs (CRC) program. Alain Pacis is a doctoral student in Bioinformatics at the University of Montreal.
About the Sainte-Justine University Hospital Research Center (CHU Sainte-Justine)
The Sainte-Justine University Hospital Research Center is a leading institution in mother and child research. Focused on the discovery of novel means of prevention, less invasive and faster treatments, and promising avenues of personalized medicine, it brings together over 200 researchers, including more than 90 clinical researchers and 360 graduate and post-doctoral students. The center is an integral part of the Sainte-Justine University Hospital, the largest mother and child hospital in Canada and the second largest pediatric hospital in North America. Details: recherche.chusj.org