Overview of the pan-sRNome in P. aeruginosa strains. (IMAGE)
Caption
(A) Pan-sRNome profiling of P. aeruginosa. Classification of 58 annotated sRNAs from 484 P. aeruginosa genome data into 3 categories: core sRNAs (sRNAs found in all 484 strains), accessory sRNAs (sRNAs found in 2 to 483 strains), and unique sRNAs (sRNAs only found in 1 strain). Eight representative strains, including laboratory, clinical, and reference isolates, are highlighted, with nucleotide sequence identity indicated in the right-hand legend. (B) Distribution of the 58 annotated sRNAs within the P. aeruginosa Pan-sRNome, categorized by prevalence across strains. (C) Categorization of 9 new sRNAs within the Pan-sRNome of P. aeruginosa. (D) sRNA composition across 8 representative P. aeruginosa strains. A core set of 38 sRNAs was universally detected, while a unique sRNA was identified exclusively in the clinical strain PABL017. The number of accessory sRNAs varies from 6 to 15 across strains. (E) Genomic localization features of 58 sRNAs in P. aeruginosa. The pie chart shows the genomic positions of 58 representative sRNA sequence homologs, with 9 located within coding sequences (CDSs), 37 in intergenic regions (IGRs), and 12 spanning both CDSs and IGRs.
Credit
Tianmin Li, Beifang Lu, Fang Chen, Letong Xu, Yizhou Zhang, Fangzhou Xie, Yue Sun, Chunyan Yao, Jiadai Huang, Tianlong He, Youyue Li, Yiqing Ding, Haiyan Hu, Shaojun Tang, Xin Deng
Usage Restrictions
Credit must be given to the creator. Only noncommercial uses of the work are permitted. No derivatives or adaptations of the work are permitted.
License
CC BY-NC-ND