News Release

Life’s work of University of South Florida researcher uncovers first ancient DNA from Swahili civilization

Study brings peace, restores pride to millions of people who identify as Swahili by overturning false narratives and providing clarity to Swahili heritage

Peer-Reviewed Publication

University of South Florida


image: University of South Florida anthropologist Chapurukha Kusimba on site along the Swahili Coast in East Africa. view more 

Credit: Chapurukha Kusimba, University of South Florida

Media contact:
John Dudley
National media relations manager
Univerisity of South Florida

(814) 490-3290


TAMPA, Fla. (March 23, 2023) – A University of South Florida anthropologist has uncovered the first ancient DNA from the Swahili Civilization, prosperous trading states along the coast of East Africa dating back to the 7th century.

From Kenya to Mozambique, Chapurukha Kusimba, a USF professor of anthropology, dedicated 40 years to studying the ancestry of those who built the civilizations – a debate that many Swahilis feel robbed them of their heritage for centuries.

“This research has been my life’s work – this journey to recover the past of the Swahili and restore them to rightful citizenship,” Kusimba said. “These findings bring out the African contributions, and indeed, the Africanness of the Swahili, without marginalizing the Persian and Indian connection.”

Published in Nature, the study examines the DNA of 80 individuals from as long as 800 years ago – making it the first ancient DNA uncovered from the Swahili Civilization.

As part of his decades-long research, Kusimba, a Kenya native, spent time with the people of Swahili to gain their trust before receiving their approval to complete cemetery excavations. To respect the remains, Kusimba finished the sampling and re-burial process all in one season.

Working alongside Harvard geneticists David Reich and Esther Brielle and corresponding authors, Jeff Fleisher from Rice University and Stephanie Wynne-Jones from University of York, Kusimba discovered the ancestry of the people analyzed was both African and Asian. The DNA revealed a pattern: the overwhelming majority of male-line ancestors came from Asia, while the female-line ancestors came from Africa.

Despite their intermarrying, descendants spoke an African language, not an Asian one. This led researchers to conclude that African women had great influence on the formation of the culture. So much so, the villages were established prior to colonialism from Asia, making women the primary holders of economic and social power.

The findings challenge centuries-old narratives – constructed by other African natives – that suggest wealthier Swahilis did not have real ancestral connections to Asia and only claimed they did in order to minimize their African heritage to obtain higher social status and cultural affinities. Despite the vital role Swahilis played in trade between Africa and the rest of the Indian Ocean world for more than 2,500 years, Kusimba’s previous work from the 1990s documented the poor treatment of Swahili descendants as a result of the narratives.

The study’s results prove Asian and African ancestors began intermarrying at least 1,000 years ago, long after Africans had established villages.

“Our results do not provide simple validation for the narratives previously advanced in archaeological, historical or political circles,” Kusimba said. “Instead, they contradict and complicate those narratives.”

By challenging and overturning narratives imposed from the outside for political and economic ends, Kusimba said, the research brings peace and restores pride to the millions of people who identify as Swahili today. Up until now, it has been difficult to determine how people who now identify as Swahili relate to people of the early modern Swahili culture.

Kusimba plans to continue his research on the Swahili to gather more DNA and create a larger sample size to better analyze a broader, more socioeconomically diverse population. The successful methods and collaboration between anthropologists and geneticists throughout this project suggest a possible resolution to longstanding questions around the heritage of other groups of people who founded ancient cities and civilizations, including ongoing disagreement among scholars around whether the ancient Egyptian civilization is African in origin.

“There is always tension between anthropology and genetics surrounding the interpretation of the material,” Kusimba said. “But working with my colleagues from Harvard, Rice University and University of York to ensure that the anthropological explanation accommodated the genetic data analysis without being simplistic has been so rewarding.”

Note: Interview requests for Harvard scholars David Reich and Esther Brielle should be directed to:

Senior Director, Science Communications/Media Relations
Harvard Medical School | Office of Communications and External Relations
(617) 432-0441


About the University of South Florida

The University of South Florida, a high-impact global research university dedicated to student success, generates an annual economic impact of more than $6 billion. Over the past 10 years, no other public university in the country has risen faster in U.S. News and World Report’s national university rankings than USF. Serving more than 50,000 students on campuses in Tampa, St. Petersburg and Sarasota-Manatee, USF is designated as a Preeminent State Research University by the Florida Board of Governors, placing it in the most elite category among the state’s 12 public universities. USF has earned widespread national recognition for its success graduating under-represented minority and limited-income students at rates equal to or higher than white and higher income students. USF is a member of the American Athletic Conference. Learn more at

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